Genetic Diversity of Sheep Breeds from Albania, Greece, and Italy Assessed by Mitochondrial DNA and Nuclear Polymorphisms (SNPs)

Table 3

Average number of nucleotide differences, D (below), and average number of nucleotide substitutions per site between populations, Dxy [48] (above).

	BER	ALT	LAT	LAN	GDP	BAR	RUD	SHK	KAL	ORI	PIL	KEF	LES	KIM	KAR	SKO	ANO	SFA
BER	*	0.009	0.009	0.012	0.011	0.018	0.011	0.021	0.009	0.017	0.009	0.018	0.018	0.025	0.012	0.011	0.008	0.009
ALT	3.908	*	0.007	0.011	0.009	0.017	0.009	0.02	0.007	0.016	0.008	0.016	0.017	0.024	0.011	0.009	0.006	0.008
LAT	3.728	2.93	*	0.01	0.009	0.016	0.009	0.02	0.007	0.015	0.007	0.016	0.017	0.025	0.01	0.008	0.006	0.007
LAN	5.079	4.425	4.279	*	0.012	0.019	0.013	0.022	0.01	0.018	0.01	0.019	0.019	0.026	0.013	0.012	0.01	0.01
GDP	4.632	3.906	3.756	5.134	*	0.018	0.011	0.021	0.009	0.017	0.01	0.017	0.018	0.024	0.012	0.011	0.009	0.009
BAR	7.447	6.933	6.856	8.107	7.579	*	0.018	0.026	0.016	0.023	0.017	0.023	0.024	0.03	0.02	0.018	0.016	0.016
RUD	4.612	3.95	3.7	5.245	4.711	7.647	*	0.021	0.009	0.017	0.01	0.018	0.018	0.025	0.012	0.011	0.008	0.009
SHK	8.778	8.272	8.345	9.269	8.696	10.567	8.789	*	0.02	0.025	0.02	0.025	0.025	0.029	0.023	0.021	0.02	0.02
KAL	3.712	3	2.708	4.183	3.754	6.741	3.778	8.241	*	0.015	0.007	0.016	0.017	0.024	0.01	0.008	0.006	0.007
ORI	7.108	6.488	6.395	7.536	7.132	9.4	7.122	10.395	6.352	*	0.016	0.023	0.023	0.029	0.018	0.017	0.015	0.015
PIL	3.91	3.289	3.011	4.5	4.021	7.049	4.067	8.419	2.978	6.556	*	0.017	0.017	0.025	0.011	0.009	0.007	0.007
KEF	7.349	6.861	6.832	7.853	7.319	9.804	7.475	10.306	6.757	9.486	6.971	*	0.022	0.026	0.019	0.018	0.016	0.016
LES	7.515	7.042	6.941	8.053	7.507	10.1	7.588	10.396	6.896	9.576	7.125	9.367	*	0.027	0.019	0.018	0.016	0.016
KIM	10.426	10.083	10.276	10.994	10.211	12.45	10.438	11.931	10.194	12.028	10.383	11.141	11.375	*	0.026	0.026	0.024	0.024
KAR	5.144	4.478	4.197	5.595	5.139	8.217	5.185	9.378	4.294	7.65	4.503	7.894	7.975	10.975	*	0.012	0.01	0.01
SKO	4.497	3.852	3.538	4.989	4.544	7.585	4.611	8.883	3.472	7.102	3.719	7.455	7.618	10.813	4.936	*	0.008	0.009
ANO	3.514	2.678	2.357	4.053	3.526	6.614	3.505	8.123	2.439	6.132	2.712	6.655	6.73	10.079	4.003	3.301	*	0.006
SFA	3.768	3.164	2.878	4.266	3.801	6.698	3.834	8.015	2.906	6.266	3.182	6.658	6.77	9.757	4.284	3.596	2.643	*