| Class/subclass |
Order | Species |
aClone/cluster |
bLength, bp |
cReference and/or accession number |
dOrganization (one- or two-tasiARF/AP2/TAS6) |
| Bryopsida/Dicranidae |
Pottiales | Bryoerythrophyllum inaequalifolium | 27-Bin/ TAS3b,c,e | 236 | KC812740 | tasiARF/AP2 | Gremiales | Coscinodon humilis | 20-Chu/ TAS3b,c,e | 234 | Krasnikova et al., 2011 [24] HQ709423 | —“— | C. humilis | 16-Chu/ TAS3b,c,e | 228 | Krasnikova et al., 2011 [24] HQ709422 | —“— | Schistidium elegantulum | 24-Sce/ TAS3b,c,e | 229 | Krasnikova et al., 2011 [24] HQ709424 | —“— | Grimmia cribrosa | 43-Gcr/ TAS3b,c,e | 228 | Krasnikova et al., 2011 [24] HQ709421 | —“— | Dicranales | Fissidens taxifolius | 17-Fit/ TAS3b,c,e | 192 | Krasnikova et al., 2011 [24] HQ709425 | —“— | Ceratodon purpureus | 48-Cpu/ TAS3b,c,e | 231 779e | SRR074890.1165977.2 | tasiARF/AP2/ TAS6 | Amphidium mougeotii | 56-Amo/ TAS3b,c,e | 234 | KC812745 | tasiARF/AP2 | Leucobryum glaucum | 41-Lgl/ TAS3b,c,e | 226 | KC812750 | —“— | L. glaucum | 42-Lgl/ TAS3b,c,e | 192 | KC812749 | —“— | Dicranum pacificum | 44-Dpa/ TAS3b,c,e | 232 | KC812741 | —“— |
| Bryopsida/Bryidae |
Orthotrichales | Orthotrichum pumilum | 5-Opu/ TAS3b,c,e | 199 | Krasnikova et al., 2011 [24] HQ709419 | —“— | O. pumilum | 24-Opu/ TAS3a,d,f | 246 | Krasnikova et al., 2011 [24] HQ709420 | —“— | Hypnales | Brachythecium latifolium | 47-Br/ TAS3b,c,e | 199 | Krasnikova et al., 2011 [24] FJ804748 | —“— | B. latifolium | 50-Br/ TAS3a,d,f | 255 | Krasnikova et al., 2011 [24] FJ804747 | —“— | B. albicans | 37-Bal/ TAS3b,c,e | 199 | Krasnikova et al., 2011 [24] HQ709414 | —“— | B. rivulare | 11-Brar/ TAS3b,c,e | 199 | KC812739 | —“— | B. rivulare | 36-Brar/ TAS3a,d,f | 255 1444e | KC812738 (Illumina sequence) | tasiARF/AP2/ TAS6 | Homalothecium philippeanum | 7-Hp/ TAS3b,c,e | 199 | Krasnikova et al., 2011 [24] HQ709415 | tasiARF/AP2 | Amblystegium sp | 52-Ambly/ TAS3b,c,e | 191 | KC812762 | —“— | Oxyrrhynchium hians | 25-Oxy/ TAS3b,c,e | 199 | Krasnikova et al., 2011 [24] HQ709418 | —“— | O. hians | 32-Oxy/ TAS3a,d,f | 253 | KC812761 | —“— | Pylaisia polyantha | 10-Pyp/ TAS3b,c,e | 199 | Krasnikova et al., 2011 [24] HQ709416 | —“— | P. polyantha | 11-Pyp/ TAS3a,d,f | 253 | Krasnikova et al., 2011 [24] HQ709417 | —“— |
Hookeriales | Hookeria lucens | 49-H/ TAS3b,c,e | 190 | Krasnikova et al., 2011 [24] FJ804749 | —“— | Bryales | Pohlia nutans | Pnu-30698 TAS3a,d,f | 259 920e | GACA01023180.1 | tasiARF/AP2/ TAS6 | Plagiomnium medium | 41-Pme/ TAS3a,d,f | 236 | KC812756 | tasiARF/AP2 | Ptychostomum pseudotriquetrum | 72-Pps/ TAS3a,d,f | 246 | KC812758 | —“— | P. pseudotriquetrum | 16-Pps/ TAS3b,c,e | 193 | KC812757 | —“— | Bryum argenteum | 9-Bar/ TAS3a,d,f | 233 | KC812760 | —“— | B. argenteum | 4-Bar/ TAS3b,c,e | 192 | KC812759 | —“— | Bartramiales | Bartramia halleriana | 32-Bha/ TAS3b,c,e | 228 | KC812748 | —“— | B. halleriana | 28-Bha/ TAS3a,d,f | 272 | KC812747 | —“— | B. halleriana | 29-Bha/ TAS3a,d,f | 254 | KC812746 | —“— |
| Bryopsida/Funariidae | Encalyptales | Encalypta rhaptocarpa | 35-Erh/ TAS3a,d,f | 253 | KC791767 | —“— | E. rhaptocarpa | 16-Erh/ TAS3b,c,e | 249 | KC791768 | —“— | E. rhaptocarpa | 31-Erh/ TAS3a,d,f | 253 | KC791769 | —“— | Funariales | Physcomitrella patens | PpTAS3a/ TAS3a,d,f | 255 895e | Arif et al., 2012 [20] | tasiARF/AP2/ TAS6 | P. patens | PpTAS3d/ TAS3a,d,f | 256 1250e | Arif et al., 2012 [20] | —“— | P. patens | PpTAS3f/ TAS3a,d,f | 245 1234e | Arif et al., 2012 [20] | —“— | P. patens | PpTAS3c/ TAS3b,c,e | 259 | Arif et al., 2012 [20] | tasiARF/AP2 | P. patens | PpTAS3b/ TAS3b,c,e | 192 | Arif et al., 2012 [20] | —“— | P. patens | PpTAS3e/ TAS3b,c,e | 192 | Arif et al., 2012 [20] | —“— |
| Bryopsida/Timmiidae | Timmiales | Timmia austriaca | 9-Tau/ TAS3a,d,f | 254 | KC812755 | —“— |
| Tetraphidopsida | Tetraphidales | Tetraphis pellucida | 73-Tpe/ TAS3b,c,e | 275 | KC812754 | —“— | T. pellucida | 80-Tpe/ outside | 251 | KC812753 | —“— |
| Polytrichopsida | Polytrichales | Polytrichum commune | 122-Pco/ outside | 227 | KC812751 | —“— | P. commune | 124-Pco/ TAS3b,c,e | 262 | KC812752 | —“— |
| Andreaeopsida | Andreaeales | Andreaea rupestris | 13-Aru/ outside | 254 | KC812744 | —“— | A. rupestris | 14-Aru/ outside | 272 | KC812743 | —“— |
| Sphagnopsida | Sphagnales | Sphagnum squarrosum | Not found | — | Krasnikova et al., 2011 [24] | — | S. girgensohnii | Not found | — | Krasnikova et al., 2011 [24] | — |
| Marchantiopsida
| Marchantiales | Marchantia polymorpha | 1-Mpo/ outside | 256 | KC812742 SRR072168.997878.2 | tasiAP2 |
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