Research Article

Chaotic Multiquenching Annealing Applied to the Protein Folding Problem

Table 7

Comparison of results with other implementations.

Instance Approach Average energy (Kcal/mol) Processing time (minutes) Average dRMSD

Met CMQA −5.1922 1.2345 0.8993
Met MQA plus DEP −0.3775 2.8278 0.8883
Met CSA 20.0864 0.0593 1.0267
Proinsulin CMQA −122.8490 42.6216 0.8382
Proinsulin MQA plus DEP −120.6576 24.8549 0.8357
Proinsulin CSA 480.2667 1.9144 1.3263
T0549 CMQA −264.5707 260.5810 0.7793
T0549 MQA plus DEP −259.5423 187.5398 0.7277
T0549 CSA 1795.7408 12.9269 1.4320
T0335 CMQA −373.4908 426.6551 0.9731
T0335 MQA plus DEP −298.4703 130.3261 1.0453
T0335 CSA 3745.1859 3.3071 1.3413
T0281 CMQA −316.2052 499.3486 2.9426
T0281 MQA plus DEP −310.6578 407.8754 2.7654
T0281 CSA 2998.1609 22.6357 3.1280