Transcriptome Analysis of Gelatin Seed Treatment as a Biostimulant of Cucumber Plant Growth

Table 1

Overview of mapping of RNA-seq reads against the reference genome.

Sample	Treatment	Time point/leaf	Rep.	Number of Total reads	Uniquely mapped reads	Percent read uniquely mapped to reference (%)	Percent read uniquely mapped to exons (%)	Percent read uniquely mapped to introns (%)
1	Control	T1-L1	1	12,019,363	9,350,227	77.79	98.71	1.29
2	Control	T1-L1	2	8,624,277	6,592,181	76.44	98.61	1.39
3	Control	T1-L1	3	14,970,567	10,499,989	70.14	99.36	0.64
4	Control	T1-L2	1	10,128,190	7,724,322	77.03	98.73	1.27
5	Control	T1-L2	2	9,216,330	6,472,955	70.23	98.33	1.67
6	Control	T1-L2	3	14,144,786	9,498,041	67.15	98.86	1.14
7	Treated	T1-L1	1	17,361,035	13,764,974	79.29	99.10	0.90
8	Treated	T1-L1	2	8,794,498	4,518,865	51.38	98.99	1.01
9	Treated	T1-L1	3	16,744,466	12,843,001	76.70	99.17	0.83
10	Treated	T1-L2	1	21,897,381	16,628,402	75.94	98.64	1.36
11	Treated	T1-L2	2	8,393,223	5,533,323	65.93	98.58	1.42
12	Treated	T1-L2	3	16,743,616	12,757,850	76.20	98.09	1.91
13	Control	T2-L1	1	13,141,492	10,676,776	81.24	98.62	1.38
14	Control	T2-L1	2	13,736,384	10,695,841	77.87	98.61	1.39
15	Control	T2-L1	3	23,334,193	17,068,298	73.15	98.98	1.02
16	Control	T2-L2	1	12,638,497	10,042,325	79.46	99.19	0.81
17	Control	T2-L2	2	16,590,125	2,877,719	17.35	99.06	0.94
18	Control	T2-L2	3	32,818,854	23,045,970	70.22	99.17	0.83
19	Treated	T2-L1	1	8,454,166	5,946,132	70.33	98.50	1.50
20	Treated	T2-L1	2	14,493,239	11,039,888	76.17	98.61	1.39
21	Treated	T2-L1	3	25,311,395	19,265,850	76.12	98.53	1.47
22	Treated	T2-L2	1	8,279,148	6,515,229	78.69	99.11	0.89
23	Treated	T2-L2	2	25,182,470	4,169,826	16.56	98.99	1.01
24	Treated	T2-L2	3	24,438,920	17,400,788	71.20	98.00	2.00
Total				377,456,615	254,928,772
Mean				15,727,359	10,622,032	68.86	98.77	1.23
SD				6,671,306	5,195,189	17.15	0.35	0.35