| | Cluster | Number of genotypes | % total | Name of genotypes |
| | I | 19 | 16.81 | Nunia, Chini Sagar (), Tilkapur, Kalobhog, Jabsiri, Chinisakkor, Noyonmoni, Tulsimoni, Khirshabuti, Gua masuri, Rajbhog, Baoijhaki, Tulsimala, Desikatari, Thakurbhog, Tulsimaloty, Radunipagal, Khasa, and Kataribhog | | II | 11 | 9.73 | Begun bichi, Elai, Bashmati 370, Sugandhi dhan, Khazar, Basmati Sufaid 106, BRRI dhan50, Basmati 37, Basnatu sufaid 187, BU dhan2R, and Bashful | | III | 17 | 15.04 | Jirabuti, Soru kamina, Kamini soru, Doiarguru, Luina, Kalijira (short grain), Philliphine kataribhog, Jirabhog (Bolder), Uknimodhu, Jira dhan, Badshabhog, Kalijira (long grain), Jesso balam, Dakshahi, Straw, Dubsail, and Sunduri samba | | IV | 13 | 11.50 | Sagardana, Kalgochi, Chiniatob, Gopalbhog, Hatisail, Buchi, BRRI dhan38, Gordoi, Basmati, Padmabhog, Oval TAPL-2990, Kalijira TAPL-74, and Kalobakri | | V | 8 | 7.08 | Saubail, Begunmala, Rajbut, Ranisalut, Gandhakusturi, Jirakatari, Awned TAPL-545, and Black TAPL-554 | | VI | 3 | 2.65 | Sakkorkhana, Kalijira TAPL-64, and Kalijira TAPL-68 | | VII | 6 | 5.31 | Chini Kanai, Chinigura, Khaskani, BRRI dhan34, BRRI dhan37, and Chinisail | | VIII | 18 | 15.92 | Chinniguri, Premful, Baoibhog, Sakkorkhora, BR5, Uknimodhu, Chiniatob-2, Begunbichi-2, Bhatir cikon, Dolagocha, Dhan chikon, Badshabhog-2, Malshira, Sadagura, Chinikanai, Meedhan, Gobindhabhog, and Fulkari | | IX | 8 | 7.08 | Sakor, Binnaphul, Lal Soru, Duksail, Tilokkachari, Chinairri, Kalonunia, and Thakurbhog-2 | | X | 10 | 8.85 | Meny, Kalomala, Khasa Mukpura, Bawaibhog-2, Khuti chikon, Tulsimala-2, Modhumadab, Parbatjira, Dudsail, and Maloti |
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