BioMed Research International

Scalable Machine Learning Algorithms in Computational Biology and Biomedicine 2021


Publishing date
01 Sep 2021
Status
Published
Submission deadline
16 Apr 2021

Lead Editor

1University of Electronic Science and Technology of China, Chengdu, China

2Silesian University of Technology, Gliwice, Poland

3Ohio State University, Columbus, USA

4University of Texas Health Science Center at Houston, Houston, USA


Scalable Machine Learning Algorithms in Computational Biology and Biomedicine 2021

Description

Since the 'Precision Medicine' initiative was launched by President Obama, a huge challenge and chance for the computational biology and biomedicine community has been presented. In recent years, computational methods appeared vastly in biomedicine and bioinformatics research, including medical image analysis, healthcare informatics, cancer genomics, etc. Lots of prediction and mining works were required on the medical data, such as tumour images, electronic medical records, micro-array, GWAS (Genome-Wide Association Study) data. Therefore, a growing number of machine learning algorithms were employed in the prediction tasks of computational biology and biomedicine.

Advanced machine learning techniques have also developed quickly in recent years. Several impacted new methods were reported in top journals and conferences. For example, affinity propagation was published in Science as a novel clustering algorithm. Recently, deep learning seems to be suitable for big data and is becoming the next hot topic. Parallel mechanisms are also being developed by scholars and industry researchers, such as Mahout. A growing number of computer scientists are devoted to advanced large-scale data mining techniques. However, the application in biomedicine has not fully been addressed and has fallen behind the technique growth.

This Special Issue aims to target recent large-scale machine learning techniques together with biomedicine applications. Applications in medical and biological scalable data are encouraged. We especially encourage clinical or specific disease genomics research with computational methods. We also welcome novel classification and clustering algorithms, such as strategies for large imbalanced learning, strategies for multiple views, learning, strategies for various semi-supervised learning, strategies for multiple kernels learning, etc. Both original research and review articles are welcomed.

Potential topics include but are not limited to the following:

  • Novel computational strategies for clinical or specific diseases research
  • Large scale classification algorithms with applications to biomedicine or bioinformatics
  • Large scale clustering algorithms with applications to biomedicine or bioinformatics
  • Imbalanced learning algorithms for biomedical or bioinformatics data
  • Multiple views learning from medical image classification
  • Semi-supervised learning strategies for biomedical or bioinformatics data
  • Ensemble learning strategies for biomedical or bioinformatics data
  • Parallel learning techniques for ultra large biomedical or bioinformatics data
  • Multiple kernels learning with application to biomedicine or bioinformatics
  • Multiple labels classification algorithms with application to biomedicine or bioinformatics

Articles

  • Special Issue
  • - Volume 2022
  • - Article ID 9044793
  • - Research Article

Application of DNA-Binding Protein Prediction Based on Graph Convolutional Network and Contact Map

Weizhong Lu | Nan Zhou | ... | Haiou Li
  • Special Issue
  • - Volume 2021
  • - Article ID 9995073
  • - Research Article

Studying the Effect of Taking Statins before Infection in the Severity Reduction of COVID-19 with Machine Learning

Alireza Davoudi | Mohsen Ahmadi | ... | Marzieh Rabiee
  • Special Issue
  • - Volume 2021
  • - Article ID 5515342
  • - Research Article

i4mC-EL: Identifying DNA N4-Methylcytosine Sites in the Mouse Genome Using Ensemble Learning

Yanjuan Li | Zhengnan Zhao | Zhixia Teng
  • Special Issue
  • - Volume 2021
  • - Article ID 9923112
  • - Research Article

LSTMCNNsucc: A Bidirectional LSTM and CNN-Based Deep Learning Method for Predicting Lysine Succinylation Sites

Guohua Huang | Qingfeng Shen | ... | Zu-Guo Yu
  • Special Issue
  • - Volume 2021
  • - Article ID 9933873
  • - Research Article

An Ensemble Learning-Based Method for Inferring Drug-Target Interactions Combining Protein Sequences and Drug Fingerprints

Zheng-Yang Zhao | Wen-Zhun Huang | ... | Chang-Qing Yu
  • Special Issue
  • - Volume 2021
  • - Article ID 9987819
  • - Research Article

Improving the Prognosis of Colon Cancer through Knowledge-Based Clinical-Molecular Integrated Analysis

Danyang Tong | Yu Tian | ... | Jingsong Li
  • Special Issue
  • - Volume 2021
  • - Article ID 5556784
  • - Research Article

Identifying Infliximab- (IFX-) Responsive Blood Signatures for the Treatment of Rheumatoid Arthritis

ShiJian Ding | ZhanDong Li | ... | Yu-Dong Cai
  • Special Issue
  • - Volume 2021
  • - Article ID 5561569
  • - Research Article

LC-MS/MS-Based Quantitative Proteomics Analysis of Different Stages of Non-Small-Cell Lung Cancer

Murong Zhou | Yi Kong | ... | Qian Zhang
  • Special Issue
  • - Volume 2021
  • - Article ID 6639698
  • - Research Article

Identifying the Immunological Gene Signatures of Immune Cell Subtypes

Yu-Hang Zhang | Zhandong Li | ... | Yu-Dong Cai
  • Special Issue
  • - Volume 2021
  • - Article ID 5542224
  • - Review Article

Recent Advances in Predicting Protein S-Nitrosylation Sites

Qian Zhao | Jiaqi Ma | ... | Ke Han
BioMed Research International
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Acceptance rate8%
Submission to final decision110 days
Acceptance to publication24 days
CiteScore5.300
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