Family Species Total length (bp) # of SNPs # of INDELs Comparison samples Ref. Marchantiaceae Marchantia polymorpha 120,288~120,304 4 0 Samples isolated in Korea Kitashirakawa-2 (Japan) [71 ] 0 0 Takaragaike-1 (Japan) Kitashirakawa-2 (Japan) 69 660 MG762001 (Poland) Kitashirakawa-2 (Japan) Selaginellaceae Selaginella tamariscina 126,368~126,700 1,213 1,641 Sample isolate in Korea Sample isolate in China [74 ] Selaginella uncinate 144,161~144,710 525 602 Sample isolate in Japan Sample isolate in China Magnoliaceae Magnolia kobus 159,411~159,443 50 50 Sample isolate in Korea (Jeju Island) Sample isolate in Korea (Jeju Island) In prep. Liriodendron tulifipera 159,886 12 0 Sample isolate in Korea Sample isolate in China [52 ] Nymphaeaceae Nymphaea alba 159,25~159,930 11 6 Sample imported in Korea Sample isolated in Germany [16 ] Schisandraceae Illicium anisatum 142,723~142,747 21 114 Sample isolated in Korea Sample isolated in USA [102 ] Rubiaceae Coffea arabica 155,186~155,277 2 2 Cold hardness coffee tree (CH3) planted in Jeju Island NC_008535 [62 ] 0 2 Coffee tree showing high productivity (HP1) in Jeju Island NC_008535 [61 ] 0 84 Coffee tree imported to Korea from Indonesia in near to 30 years ago (IN1) NC_008535 [50 ] 3 8 NC_008535 Coffea arabica “Typica”[59 ] 0 3 KY085909 0 4 MK342634, CH3 isolate 0 4 HP1 isolate 0 90 IN1 isolate 3 6 NC_008535 Coffea arabica “Typica Bluemoutain”[60 ] 0 1 KY085909 0 6 MK342634, CH3 isolate 0 6 HP1 isolate 0 88 IN1 isolate 0 2 Coffea arabica “Typica”0 0 CH1 isolate CH2 isolate [63 ] Theaceae Camellia japonica 156,606~157,047 25 2 Sample isolated in Soyeonpyeong-do, Incheon, Korea Wimi-ri in Jeju, Korea [72 ] 78 643 Sample isolated in Soyeonpyeong-do, Incheon, Korea Sample isolated in China 1 1 Sample isolated in Seogwang-ri, Jeju, Korea Sample isolated in Soyeonpyeong-do, Incheon, Korea [105 ] Caryophyllaceae Pseudostellaria longipedicellata 149,668 0 0 Sample isolate in Mt. Taebak, Korea Sample isolate in Mt. Taebak, Korea Unpub. Pseudostellaria palibiniana 149,639~149,668 84 125 Sample isolated in Mt. Taebaek, Korea Sample isolated in Mt. Gwangdeok, Korea [25 ] Salicaceae Salix koriyanagi 155,548 0 0 Male sample in Seoul, Korea Female sample in Seoul, Korea [67 ] Rosaceae Agrimonia pilosa 155,125 258 542 Samples isolated in Korea Samples isolated in China [110 ] Duchesnea indica 156,050 45 273 Samples isolated in Korea Samples isolated in China [19 ] Duchesnea chrysantha 156,29~156,387 48 58 Sample isolated in Korea Sample isolated in Japan [21 ] Pyrus ussuriensis 159,986~160,157 121 781 Sample isolated in Bonghwa-gun, Korea Sample isolated in Mt. Hambeak, Korea [68 ] Fagaceae Fagus multinervis 158,349 2 2 Sample isolated in Ulleungdo Island, Korea Sample isolated in Ulleungdo Island, Korea [111 ] Orobanchaceae Rehmannia glutinosa 153,622~153,680 147 87 Sample isolated in Korea Sample isolated in China [73 ] Cucurbitaceae Cucumis melo 155,815~156,017 2 0 Cultivar Topmark Cultivar DHL92 [76 ] 1 0 Cultivar MR-1 Cultivar DHL92 2 0 Cultivar M4- Cultivar DHL92 1 0 Cultivar M4 Cultivar DHL92 55 0 Cultivar M1-1 Cultivar DHL92 56 0 Cultivar M1-3 Cultivar DHL92 60 0 Cultivar M1-7 Cultivar DHL92 Amaranthaceae Chenopodium quinoa 69 28 Cultivar 0654 (Peru) Cultivar PI 614886 (Chile) [70 ] 33 23 Cultivar Cherry Vanilla (Oregon, USA) Cultivar PI 614886 (Chile) 16 37 Cultivar Chucapaca (Bolivia) Cultivar PI 614886 (Chile) 36 23 Cultivar CICA-17 (Peru) Cultivar PI 614886 (Chile) 0 0 Cultivar G-205-95DK (Denmark) Cultivar PI 614886 (Chile) 0 0 Cultivar Ku-2 (Chile) Cultivar PI 614886 (Chile) 36 24 Cultivar Kurmi (Bolivia) Cultivar PI 614886 (Chile) 35 23 Cultivar Ollague (Chile) Cultivar PI 614886 (Chile) 25 13 Cultivar Pasankalla (Peru) Cultivar PI 614886 (Chile) 17 36 Cultivar PI 634921 (Chile) Cultivar PI 614886 (Chile) 37 24 Cultivar Real (Bolivia) Cultivar PI 614886 (Chile) 3 0 Cultivar Regalona (Chile) Cultivar PI 614886 (Chile) 33 23 Cultivar Salcedo INIA (Peru) Cultivar PI 614886 (Chile) Dysphania pumilio 151,960~151,962 25 2 Sample isolated in Anyang, Korea Sample isolated in Gangseo-gu, Seoul, Korea [28 ] Suaeda japonica 152,109 3 3 Sample isolated in Ganghwa, Korea Sample isolated in Julpo, Korea [112 ] Eucommiaceae Eucommia ulmoides 163,341~163,586 75 80 Sample isolated in China Sample isolated in China [75 ] Dioscoreaceae Dioscorea polystachya 153,243~153,292 99 0 FLW genotype BJXS genotype [77 ] 98 0 TSW genotype BJXS genotype 110 0 YTW genotype BJXS genotype 99 0 XSW genotype BJXS genotype 106 0 NJW genotype BJXS genotype 99 0 MHW genotype BJXS genotype Asteraceae Artemisia fukudo 151,011~151,021 7 11 Sample isolated in Aphaedo, Korea Sample isolated in Jeungdo, Korea [113 ] Oleaceae Abeliophyllum distichum 155,982~156,019 93 56 Sample isolated in Jincheon-gun, Korea Cultivar “Okhwang 1-ho” [90 ] 9 11 Cultivar “Okhwang 1-ho” Cultivar candidate “Dae Ryun” [91 ] 102 63 Sample isolated in Jincheon-gun, Korea Cultivar candidate “Dae Ryun” 9 11 Cultivar candidate “Dae Ryun” Cultivar candidate “Sang Jae” [92 ] 93 56 Sample isolated in Jincheon-gun, Korea Cultivar candidate “Sang Jae” 1 0 MF407183 Cultivar candidate “Sang Jae” Orchidaceae Goodyera schlechtendaliana 153,661~154,438 200 511 Sample isolated in Korea (MK144665) Sample isolated in Korea with different morphology (MK134679) [53 ] 282 1,060 Sample isolated in Korea (MK144665) Sample isolated in China (AB893949) 827 1,794 Sample isolated in Korea (MK144665) Sample isolated in China (NC_029364) 700 1,066 Sample isolated in Korea (MK144665) Sample isolated in China (LC085346) 163 651 Sample isolated in Korea with different morphology (MK134679) Sample isolated in China (AB893949) 740 1,470 Sample isolated in Korea with different morphology (MK134679) Sample isolated in China (NC_029364) 597 1,065 Sample isolated in Korea with different morphology (MK134679) Sample isolated in China (LC085346) 844 2,045 Sample isolated in China (AB893949) Sample isolated in China (NC_029364) 445 414 Sample isolated in China (AB893949) Sample isolated in China (LC085346) 700 2,133 Sample isolated in China (LC085346) Sample isolated in China (LC085346) Gastrodia elata 35,066~35,304 457 670 Sample isolated in Korea (MN296709) Sample isolated in China [56 ] 493 650 Sample isolated in Korea (MN296709) Sample isolated in China [57 ] 324 630 Sample isolated in Korea (MN026874) Sample isolated in Korea (MN296709) Adoxaceae Viburnum erosum 158,587~158,624 16 49 Sample isolated in Korea Sample isolated in Korea (MN218778) [64 ] Ranunculaceae Aconitum coreanum 157,024~157,040 5 17 Sample isolated in Korea Sample isolated in Korea (NC_031421) [89 ] 23 62 Sample isolated in Korea Sample isolated in Korea (KU318669) Staphyleaceae Euscaphis japonica 160,467~160,606 424 809 Sample isolated in Korea Sample isolated in China (Oh et al., under review) Thymelaeaceae Daphne genkwa 132,741~132,869 69 650 Sample isolated in Korea Sample isolated in China (Oh et al., under review)
