Veterinary Medicine International / 2014 / Article / Tab 3 / Research Article
Molecular Detection, Phylogenetic Analysis, and Identification of Transcription Motifs in Feline Leukemia Virus from Naturally Infected Cats in Malaysia Table 3 Distance matrix showing sequence relationship among local FeLV isolates.
(a) FeLV-Rickard
FeLV-FAIDS FeLV-UPM03 FeLV-UPM18 FeLV-UPM20 FeLV-UPM29 FeLV-UPM28 FeLV-UPM12 FeLV-UPM06 FeLV-Rickard [AF052723] 98.12 94.925 93.609 93.797 96.805 96.805 96.992 96.617 FeLV-FAIDS [M18247] 98.12 95.301 93.985 94.173 96.429 96.429 96.617 96.617 FeLV-UPM03 [HQ197369] 94.925 95.301 96.429 98.496 94.737 94.737 94.925 94.549 FeLV-UPM18 [JF815541] 93.609 93.985 96.429 96.053 93.797 93.797 93.985 93.609 FeLV-UPM20 [JF815543] 93.797 94.173 98.496 96.053 93.609 93.609 93.797 93.421 FeLV-UPM29 [JF815552] 96.805 96.429 94.737 93.797 93.609 100 99.812 99.436 FeLV-UPM28 [JF815551] 96.805 96.429 94.737 93.797 93.609 100 99.812 99.436 FeLV-UPM12 [HQ727890] 96.992 96.617 94.925 93.985 93.797 99.812 99.812 99.624 FeLV-UPM06 [HQ197372] 96.617 96.617 94.549 93.609 93.421 99.436 99.436 99.624 FeLV-UPM23 [JF815546] 96.805 96.429 94.737 93.797 93.609 99.248 99.248 99.436 99.06 FeLV-UPM21 [JF815544] 96.805 96.429 94.737 93.797 93.609 99.248 99.248 99.436 99.06 FeLV-UPM24 [JF815547] 96.805 96.429 94.737 93.797 93.609 99.248 99.248 99.436 99.06 FeLV-UPM26 [JF815549] 96.805 96.429 94.737 93.797 93.609 99.248 99.248 99.436 99.06 FeLV-UPM09 [HQ197375] 96.805 96.429 94.737 93.797 93.609 99.248 99.248 99.436 99.06 FeLV-UPM17 [JF815540] 96.617 96.241 94.549 93.609 93.421 99.06 99.06 99.248 98.872 FeLV-UPM16 [JF815539] 96.617 96.241 94.549 93.609 93.421 99.06 99.06 99.248 98.872 FeLV-UPM25 [JF815548] 96.429 96.053 94.549 93.797 93.421 98.872 98.872 99.06 98.684 FeLV-UPM19 [JF815542] 95.865 95.489 93.797 92.857 92.669 98.308 98.308 98.496 98.12 FeLV-UPM27 [JF815550] 96.617 95.865 94.173 93.233 93.045 98.684 98.684 98.872 98.496 FeLV-UPM22 [JF815545] 96.617 96.053 94.361 93.421 93.233 98.872 98.872 99.06 98.684 FeLV-UPM10 [HQ197376] 96.429 96.053 94.361 93.421 93.233 99.248 99.248 99.436 99.06 FeLV-UPM15 [JF815538] 96.992 96.617 94.925 93.985 93.797 99.436 99.436 99.624 99.248 FeLV-UPM11 [HQ197377] 96.992 96.617 94.925 93.985 93.797 99.436 99.436 99.624 99.248 FeLV-UPM13 [HQ727891] 96.805 96.429 94.737 93.797 93.609 99.624 99.624 99.812 99.436 FeLV-UPM05 [HQ197371] 96.429 96.053 94.361 93.421 93.233 99.248 99.248 99.436 99.06 FeLV-UPM07 [HQ197373] 96.805 96.429 94.737 93.797 93.609 99.624 99.624 99.812 99.436 FeLV-UPM02 [HQ197368] 96.805 96.429 94.737 93.797 93.609 99.624 99.624 99.812 99.436 FeLV-UPM01 [HQ197367] 96.805 96.429 94.737 93.797 93.609 99.624 99.624 99.812 99.436 FeLV-UPM04 [HQ197370] 96.617 96.241 94.549 93.609 93.421 99.06 99.06 99.248 98.872 FeLV-UPM08 [HQ197374] 94.737 93.985 92.669 91.729 91.541 97.18 97.18 97.368 96.992 FeLV-UPM14 [HQ727892] 95.865 96.241 99.06 96.992 97.932 95.677 95.677 95.865 95.489
(b) FeLV-UPM23 [JF815546] FeLV-UPM21 [JF815544] FeLV-UPM24 [JF815547] FeLV-UPM26 [JF815549] FeLV-UPM09 [HQ197375] FeLV-UPM17 [JF815540] FeLV-UPM16 [JF815539] FeLV-UPM25 [JF815548] FeLV-UPM19 [JF815542] FeLV-UPM27 [JF815550] FeLV-Rickard [AF052723] 96.805 96.805 96.805 96.805 96.805 96.617 96.617 96.429 95.865 96.617 FeLV-FAIDS [M18247] 96.429 96.429 96.429 96.429 96.429 96.241 96.241 96.053 95.489 95.865 FeLV-UPM03 [HQ197369] 94.737 94.737 94.737 94.737 94.737 94.549 94.549 94.549 93.797 94.173 FeLV-UPM18 [JF815541] 93.797 93.797 93.797 93.797 93.797 93.609 93.609 93.797 92.857 93.233 FeLV-UPM20 [JF815543] 93.609 93.609 93.609 93.609 93.609 93.421 93.421 93.421 92.669 93.045 FeLV-UPM29 [JF815552] 99.248 99.248 99.248 99.248 99.248 99.06 99.06 98.872 98.308 98.684 FeLV-UPM28 [JF815551] 99.248 99.248 99.248 99.248 99.248 99.06 99.06 98.872 98.308 98.684 FeLV-UPM12 [HQ727890] 99.436 99.436 99.436 99.436 99.436 99.248 99.248 99.06 98.496 98.872 FeLV-UPM06 [HQ197372] 99.06 99.06 99.06 99.06 99.06 98.872 98.872 98.684 98.12 98.496 FeLV-UPM23 [JF815546] 100 100 100 100 99.812 99.812 99.624 99.06 99.436 FeLV-UPM21 [JF815544] 100 100 100 100 99.812 99.812 99.624 99.06 99.436 FeLV-UPM24 [JF815547] 100 100 100 100 99.812 99.812 99.624 99.06 99.436 FeLV-UPM26 [JF815549] 100 100 100 100 99.812 99.812 99.624 99.06 99.436 FeLV-UPM09 [HQ197375] 100 100 100 100 99.812 99.812 99.624 99.06 99.436 FeLV-UPM17 [JF815540] 99.812 99.812 99.812 99.812 99.812 99.624 99.436 98.872 99.248 FeLV-UPM16 [JF815539] 99.812 99.812 99.812 99.812 99.812 99.624 99.436 98.872 99.248 FeLV-UPM25 [JF815548] 99.624 99.624 99.624 99.624 99.624 99.436 99.436 98.684 99.06 FeLV-UPM19 [JF815542] 99.06 99.06 99.06 99.06 99.06 98.872 98.872 98.684 98.496 FeLV-UPM27 [JF815550] 99.436 99.436 99.436 99.436 99.436 99.248 99.248 99.06 98.496 FeLV-UPM22 [JF815545] 99.624 99.624 99.624 99.624 99.624 99.436 99.436 99.248 98.684 99.248 FeLV-UPM10 [HQ197376] 99.624 99.624 99.624 99.624 99.624 99.436 99.436 99.248 98.684 99.06 FeLV-UPM15 [JF815538] 99.812 99.812 99.812 99.812 99.812 99.624 99.624 99.436 98.872 99.248 FeLV-UPM11 [HQ197377] 99.812 99.812 99.812 99.812 99.812 99.624 99.624 99.436 98.872 99.248 FeLV-UPM13 [HQ727891] 99.624 99.624 99.624 99.624 99.624 99.436 99.436 99.248 98.684 99.06 FeLV-UPM05 [HQ197371] 99.248 99.248 99.248 99.248 99.248 99.06 99.06 98.872 98.308 98.684 FeLV-UPM07 [HQ197373] 99.624 99.624 99.624 99.624 99.624 99.436 99.436 99.248 98.684 99.06 FeLV-UPM02 [HQ197368] 99.624 99.624 99.624 99.624 99.624 99.436 99.436 99.248 98.684 99.06 FeLV-UPM01 [HQ197367] 99.624 99.624 99.624 99.624 99.624 99.436 99.436 99.248 98.684 99.06 FeLV-UPM04 [HQ197370] 99.06 99.06 99.06 99.06 99.06 98.872 98.872 98.684 98.12 98.496 FeLV-UPM08 [HQ197374] 96.805 96.805 96.805 96.805 96.805 96.617 96.617 96.429 96.053 96.617 FeLV-UPM14 [HQ727892] 95.677 95.677 95.677 95.677 95.677 95.489 95.489 95.489 94.737 95.113
(c) FeLV-UPM22 [JF815545] FeLV-UPM10 [HQ197376] FeLV-UPM15 [JF815538] FeLV-UPM11 [HQ197377] FeLV-UPM13 [HQ727891] FeLV-UPM05 [HQ197371] FeLV-UPM07 [HQ197373] FeLV-UPM02 [HQ197368] FeLV-UPM01 [HQ197367] FeLV-UPM04 [HQ197370] FeLV-UPM08 [HQ197374] FeLV-UPM14 [HQ727892] FeLV-Rickard [AF052723] 96.617 96.429 96.992 96.992 96.805 96.429 96.805 96.805 96.805 96.617 94.737 95.865 FeLV-FAIDS [M18247] 96.053 96.053 96.617 96.617 96.429 96.053 96.429 96.429 96.429 96.241 93.985 96.241 FeLV-UPM03 [HQ197369] 94.361 94.361 94.925 94.925 94.737 94.361 94.737 94.737 94.737 94.549 92.669 99.06 FeLV-UPM18 [JF815541] 93.421 93.421 93.985 93.985 93.797 93.421 93.797 93.797 93.797 93.609 91.729 96.992 FeLV-UPM20 [JF815543] 93.233 93.233 93.797 93.797 93.609 93.233 93.609 93.609 93.609 93.421 91.541 97.932 FeLV-UPM29 [JF815552] 98.872 99.248 99.436 99.436 99.624 99.248 99.624 99.624 99.624 99.06 97.18 95.677 FeLV-UPM28 [JF815551] 98.872 99.248 99.436 99.436 99.624 99.248 99.624 99.624 99.624 99.06 97.18 95.677 FeLV-UPM12 [HQ727890] 99.06 99.436 99.624 99.624 99.812 99.436 99.812 99.812 99.812 99.248 97.368 95.865 FeLV-UPM06 [HQ197372] 98.684 99.06 99.248 99.248 99.436 99.06 99.436 99.436 99.436 98.872 96.992 95.489 FeLV-UPM23 [JF815546] 99.624 99.624 99.812 99.812 99.624 99.248 99.624 99.624 99.624 99.06 96.805 95.677 FeLV-UPM21 [JF815544] 99.624 99.624 99.812 99.812 99.624 99.248 99.624 99.624 99.624 99.06 96.805 95.677 FeLV-UPM24 [JF815547] 99.624 99.624 99.812 99.812 99.624 99.248 99.624 99.624 99.624 99.06 96.805 95.677 FeLV-UPM26 [JF815549] 99.624 99.624 99.812 99.812 99.624 99.248 99.624 99.624 99.624 99.06 96.805 95.677 FeLV-UPM09 [HQ197375] 99.624 99.624 99.812 99.812 99.624 99.248 99.624 99.624 99.624 99.06 96.805 95.677 FeLV-UPM17 [JF815540] 99.436 99.436 99.624 99.624 99.436 99.06 99.436 99.436 99.436 98.872 96.617 95.489 FeLV-UPM16 [JF815539] 99.436 99.436 99.624 99.624 99.436 99.06 99.436 99.436 99.436 98.872 96.617 95.489 FeLV-UPM25 [JF815548] 99.248 99.248 99.436 99.436 99.248 98.872 99.248 99.248 99.248 98.684 96.429 95.489 FeLV-UPM19 [JF815542] 98.684 98.684 98.872 98.872 98.684 98.308 98.684 98.684 98.684 98.12 96.053 94.737 FeLV-UPM27 [JF815550] 99.248 99.06 99.248 99.248 99.06 98.684 99.06 99.06 99.06 98.496 96.617 95.113 FeLV-UPM22 [JF815545] 99.248 99.436 99.436 99.248 98.872 99.248 99.248 99.248 98.684 96.617 95.301 FeLV-UPM10 [HQ197376] 99.248 99.436 99.436 99.624 99.248 99.624 99.624 99.624 99.06 97.18 95.301 FeLV-UPM15 [JF815538] 99.436 99.436 100 99.812 99.436 99.812 99.812 99.812 99.248 96.992 95.865 FeLV-UPM11 [HQ197377] 99.436 99.436 100 99.812 99.436 99.812 99.812 99.812 99.248 96.992 95.865 FeLV-UPM13 [HQ727891] 99.248 99.624 99.812 99.812 99.624 100 100 100 99.436 97.18 95.677 FeLV-UPM05 [HQ197371] 98.872 99.248 99.436 99.436 99.624 99.624 99.624 99.624 99.06 96.805 95.301 FeLV-UPM07 [HQ197373] 99.248 99.624 99.812 99.812 100 99.624 100 100 99.436 97.18 95.677 FeLV-UPM02 [HQ197368] 99.248 99.624 99.812 99.812 100 99.624 100 100 99.436 97.18 95.677 FeLV-UPM01 [HQ197367] 99.248 99.624 99.812 99.812 100 99.624 100 100 99.436 97.18 95.677 FeLV-UPM04 [HQ197370] 98.684 99.06 99.248 99.248 99.436 99.06 99.436 99.436 99.436 96.617 95.489 FeLV-UPM08 [HQ197374] 96.617 97.18 96.992 96.992 97.18 96.805 97.18 97.18 97.18 96.617 93.609 FeLV-UPM14 [HQ727892] 95.301 95.301 95.865 95.865 95.677 95.301 95.677 95.677 95.677 95.489 93.609
