Abnormally Expressed lncRNAs as Potential Biomarkers for Gastric Cancer Risk: A Diagnostic Meta-Bioinformatics Analysis

Dong, Ying-ying; Zhou, Quan; Li, Hao; Lv, Zhi; Yuan, Yuan; Sun, Li-ping

doi:https://doi.org/10.1155/2022/6712625

BioMed Research International

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Abstract Background Materials and Methods Results Discussion Conclusion Abbreviations Data Availability Conflicts of Interest Acknowledgments Supplementary Materials References Copyright Related Articles

Research Article | Open Access

Volume 2022 | Article ID 6712625 | https://doi.org/10.1155/2022/6712625

Abnormally Expressed lncRNAs as Potential Biomarkers for Gastric Cancer Risk: A Diagnostic Meta-Bioinformatics Analysis

Ying-ying Dong,^1,2Quan Zhou,^1,2Hao Li,³Zhi Lv,^1,2Yuan Yuan ,^1,2and Li-ping Sun^1,2

Academic Editor: Mihajlo Jakovljevic

Received22 Jul 2022

Revised10 Oct 2022

Accepted17 Oct 2022

Published04 Nov 2022

Abstract

Background and Aims. Abnormal expression of lncRNAs is relevant to the occurrence and development of gastric cancer (GC), but the significance remains inconclusive. We performed a diagnostic meta-bioinformatics analysis to elucidate the association between lncRNA expression and GC risk. Methods. Published datasets were selected from PubMed, Embase, CNKI, and Web of Science, up to 1st December 2021. The pooled sensitivity (SEN), specificity (SPE), positive likelihood ratio (PLR), negative likelihood ratio (NLR), diagnostic odds ratio (DOR), and area under the curve (AUC) were calculated to evaluate the diagnostic value. RNA sequencing data were downloaded for validation. Results. 54 studies with 4671 patients and 4652 matched controls were included in the meta-analysis. The pooled SEN, SPE, PLR, NLR, DOR, and AUC were 0.71, 0.76, 2.9, 0.39, 8, and 0.79, respectively. Subgroup analyses showed that the DOR and AUC of intergenic lncRNAs, circulating lncRNAs, larger sample size (>200), and high-quality () groups were superior to antisense lncRNAs, tissue lncRNAs, smaller sample size (≤200), and low-quality () groups, respectively. However, only circulating lncRNAs had significantly higher diagnostic utility than that tissue lncRNAs. Nine differentially expressed lncRNAs in the meta-analysis were verified in TCGA-STAD. PVT1 was the most effective single lncRNA, with AUC of 0.949, SEN of 0.808, and SPE of 0.969, while PVT1 and C5orf66-AS1 were the most effective combination, with AUC of 0.972, SEN of 0.941, and SPE of 0.937. Conclusion. Abnormally expressed lncRNAs, especially circulating lncRNAs, might be potential diagnostic biomarkers for GC risk. A novel combined model of lncRNAs might achieve better GC diagnosis performance.

1. Background

Long noncoding RNAs (lncRNAs) regulate cell proliferation, apoptosis, differentiation, and metastasis, which all are associated with multiple diseases, including tumorigenesis [1]. In tumorigenesis, lncRNAs are involved at the transcriptional, posttranscriptional, and epigenetic levels. Based on their genomic position in relation to the protein-encoding gene, lncRNAs can be divided into sense, antisense, bidirectional, intergenic, and intronic lncRNAs [2]. The location of the lncRNA directly influences its function in the genome. Intergenic lncRNAs regulate the expression of upstream and downstream genes, while antisense lncRNAs bind to mRNA of complementary genes to protect mRNA from RNase-mediated degradation [3]. Many studies have reported that tissue or blood lncRNAs can be used as biomarkers for cancer diagnosis. lncRNAs show broad prospects as molecular biomarkers because of their specific expression and regulation dissimilarity in specific cancers. For example, lncRNA prostate cancer-associated 3 (PCA3) is used in the diagnosis of prostate cancer [4], and highly upregulated in liver cancer (HULC) is meaningful to the diagnosis of liver cancer and the identification of hepatic metastasis in colorectal cancer [5].

Gastric cancer (GC) is the top 5 cancer type and is the fourth leading cause of cancer-related death worldwide according to Global Cancer Statistics 2020 [6]. Approximately half of those GC cases come from East Asia, especially China [7]. Prevention and early diagnosis of GC are essential. Since a positive association between H19 overexpression and GC was reported by Wu et al. in 1997 [8], accumulating studies have focused on the relationship between lncRNA expression and GC risk. Owing to the dysregulated expression levels, lncRNAs have been classified as oncogenic molecules and tumor suppressors. Some studies have reported that HOX transcript antisense RNA (HOTAIR) [9], LINC00152 [10], and LIFR-AS1 [11] were upexpressed in GC tissue, while C5orf66-AS1 [12] and lnc-GNAQ-6:1 [13] were downexpressed in GC serum, and the exosomal lnc-GNAQ-6:1 exhibited a more favored ROC than traditional biomarkers such as serum carcinoembryonic antigen (CEA), cancer antigen 19-9 (CA19-9), and carbohydrate antigen 72-4 (CA72-4) [13]. However, some studies have shown inconsistent results, which confuses us about the value of lncRNA expression in GC risk assessment. For instance, Fei et al. reported that LINC00982 was upexpressed in GC tissue [14], but Zheng et al. found that it was low expressed and acted as a tumor suppressor, and its overexpression would impair the proliferative, migratory, and invasive properties of GC cells [15]. So far, two meta-analyses investigated the diagnostic accuracy of diverse lncRNAs in GC patients [16, 17], one of which mentioned a stratified analysis of tissue and plasma samples. However, other aspects of lncRNA biology, including the impact of lncRNA genomic location on its diagnostic value, have not been explored. Moreover, only a few lncRNAs have been confirmed to have diagnostic efficacy, and the diagnostic SEN and SPE of a single lncRNA are generally low.

Therefore, we conducted a diagnostic meta-analysis exploring the association between lncRNA expression and GC risk, taking genome location and sample source into account. Additionally, using TCGA database, we constructed individual and combined lncRNA models of GC risk assessment for bioinformatics analysis and validation.

2. Materials and Methods

This systematic review meta-analysis was conducted in accordance with the Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) guidelines [18, 19].

2.1. Publication Search Strategy

We systematically searched PubMed, Embase, CNKI, and Web of Science for studies focusing on the relationship between lncRNA expression and GC. Our medical subject heading terms (for PubMed), EMTREE terms (for Embase), and text (for others) were “(RNA, Long Non-coding OR long untranslated RNA OR long non-coding RNA OR lncRNA) AND (Stomach Neoplasms OR stomach cancer OR gastric cancer).” We searched the databases of each primary study up to December 1, 2021.

Eligible studies met the following criteria: (1) studies that reported lncRNA expression data from patients were identified as GC by postoperative pathologic check according to the guideline of the National Comprehensive Cancer Network (NCCN), the European Society for Medical Oncology (ESMO), and the Chinese Society of Clinical Oncology (CSCO); (2) studies provided sufficient data to evaluate the relationship between lncRNA expression and the diagnosis of GC versus different control types (adjacent nontumor tissue, benign gastric lesions, or healthy volunteers); (3) datasets generated using qRT-PCR; (4) GAPDH and β-actin were used as qRT-PCR reference genes; and (5) the studies provided sufficient information to construct a contingency table, with false/true positives/negatives provided. Studies were excluded if (1) the studies or data were duplicated, letters to the editor, commentaries, and review papers; (2) they were not relevant to GC diagnosis/risk or lncRNA expression; and (3) contained a lack of variable data or tables [20].

2.2. Data Extraction

Two investigators (Yingying Dong and Quan Zhou) extracted all the data independently and reached a consensus regarding all items. Controversial sections were verified and resolved by Dr. Liping Sun. The following is the information extracted from the included literature: the author’s name, year of publication, country of origin, number and source of cases and controls, differential lncRNA expression, area under the curve (AUC) of the summary receiver-operating characteristic (SROC) curve, cut-off, sensitivity (SEN) and specificity (SPE), positive likelihood ratio, and negative likelihood ratio.

2.3. Methodologic Quality Assessment

Yingying Dong and Quan Zhou assessed the data quality using the Newcastle–Ottawa quality scale (NOS). A form which comprised three parts was used to assess the quality of nonrandomized studies in meta-analyses: (1) the selection of study groups, (2) the comparability of study groups, and (3) the assessment of exposure or outcomes. Each study was assigned a score of 0–9, with a score of at least 7 (of 9) indicating high quality.

2.4. Public Data Processing and Tools

lncRNA classification was based on the latest nomenclature outlined on the HGNC website (http://www.genenames.org/). Genomic positions of lncRNA in relation to protein-encoding genes were identified using the UCSC database (http://genome.ucsc.edu/) and LNCipedia version 5.2 (https://lncipedia.org/). A total of 407 GC samples from TCGA project (https://cancergenome.nih.gov/), including 375 cancer cases and 32 cancer cases with adjacent nontumor tissue (ANT), were downloaded. Morpheus database (https://software.broadinstitute.org/morpheus/) was used to identify genes that were differentially expressed in GC. RNA-seq raw read counts were converted to transcripts per million (TPM) values to normalize all samples.

2.5. Statistical Analysis

STATA 15.0 (Stata Corporation, College Station, TX, USA), Meta-Disc 1.4 (XI Cochrane Colloquium, Barcelona, Spain), RevMan 5.3 (The Nordic Cochrane Centre, The Cochrane Collaboration, Copenhagen), SPSS 21.0 (IBM Corp., Armonk, NY, USA), and GraphPad Prism 7.0 software (GraphPad Software Inc., La Jolla, CA, USA) were used for statistical analysis.

The Spearman correlation coefficient, Cochran’s test, and inconsistency index () test were used to confirm the heterogeneity of threshold or nonthreshold effects. If there was heterogeneity ( or ), the random effects model was adopted. If there was no heterogeneity, the fixed effects model was used. The subgroup differences of AUC were conducted by using a two-sided -test at a significance level of 0.05. Sensitivity analysis was performed by removing each study from the analysis to determine its impact on the overall effect. Metaregression was performed to find the origin of heterogeneity. Pooled SEN, SPE, diagnostic odds ratio (DOR), positive likelihood ratio (PLR), and negative likelihood ratio (NLR) values were generated using bivariate analysis. Deeks’ funnel plots and symmetry tests were used to investigate publication bias, with the significance threshold set at . lncRNA expression differences were analyzed by the Mann-Whitney test. Binary logistic regression analysis (enter method) was used to construct the combined diagnostic model. AUC was used to evaluate diagnostic efficacy. -test was conducted to determine the difference of AUC between different GC stages. was considered statistically significant.

3. Results

3.1. Literature Search and Study Characteristics

The study selection process is shown in Figure 1. Firstly, we retrieved 6088 articles from all selected databases; then, we excluded 2667 duplicates. After reviewing the titles and abstracts, 3055 publications were found to be irrelevant. After a full-text review, 54 studies remained to be analyzed. The diagnostic accuracy was reported separately for different lncRNAs or different sample types, so the reported data from 4671 patients and 4652 matched controls were analyzed. The main study characteristics are shown in Table 1. Sample types included tissue [9, 11, 21–48], circulating (plasma and serum) [12, 13, 47, 49–65], and gastric juice [21, 64, 66]. Most studies took specimens from Chinese population, and six studies took samples from Japanese [49], Egyptian, [53], or Iranian populations [31, 32, 34, 37].

We assessed the quality of included studies using NOS and found that the quality of the enrolled studies was acceptable. Thirty-eight studies [9, 12, 14, 21–27, 29–31, 33, 34, 36, 38–40, 42, 46–50, 52–55, 57, 62, 63, 65, 66] were of high quality while the other 16 studies [28, 32, 35, 37, 41, 43, 47, 51, 56, 58–61, 64, 67] were of moderate quality.

3.2. Determination of Diagnostic Performance

Because significant heterogeneity was observed between studies for the high values in SEN (84.23%, ), SPE (89.04%, ), PLR (83.95%, ), NLR (80.61%, ), and DOR (78.9%, ) (Table 2), we choose the random effects model for further analysis. Forest plots of the pooled SEN and SPE for lncRNAs as biomarkers are shown in Figure 2. The pooled SEN for the data was 0.71 (95% CI: 0.67–0.74), and the pooled SPE was 0.76 (95% CI: 0.71–0.79). The PLR, NLR, and DOR were 2.9 (95% CI: 2.5–3.4), 0.39 (95% CI: 0.34–0.43), and 8 (95% CI: 6–10), respectively (Table 2 and Figure 2). The AUC was 0.79 (95% CI: 0.75–0.82; Figure 3), indicative of being a suitable diagnostic index (Table 2).

3.3. Study Heterogeneity

In order to determine the potential source of heterogeneity, we performed subsequent analysis on the threshold effect and nonthreshold effect. Spearman’s rank correlation was used to assess the heterogeneity of the threshold effect since Spearman’s coefficient was 0.25 (). There was no heterogeneity from the threshold effect. In addition, the Cochran of DOR is commonly used to detect nonthreshold effect heterogeneity; we analyzed heterogeneity with Cochran’s test and test and found that their DOR values were 251.75 () and 78.9% (supplement Table S1), indicating that there was considerable heterogeneity caused by nonthreshold effect. Then, we further performed a series of analyses to find the sources of heterogeneity.

3.4. Subgroup Analysis and Metaregression

We divided the 54 studies into four subgroups for stratified analyses, including the genomic location of the lncRNA (intergenic vs. antisense), sample type (circulating vs. tissue), sample size (≤200 vs. > 200), and quality ( vs. ≥7). The details are shown in Table 2. In the location subgroups, the diagnostic SEN of lncRNAs extracted from intergenic was 0.72 (95% CI: 0.66-0.77), and the SPE was 0.78 (95% CI: 0.72-0.83), with the pooled DOR of 9 (95% CI: 6-13) and AUC of 0.81 (95% CI: 0.78-0.84). The pooled SEN and SPE of lncRNAs of antisense were 0.73 (95% CI: 0.66-0.79) and 0.71 (95% CI: 0.61-0.80), with DOR of 7 (95% CI: 4-10) and AUC of 0.78 (95% CI: 0.75-0.82). From the perspective of sample type, the diagnostic accuracy of the circulating group was significantly higher than that of the issue group, with the SEN increasing from 0.69 (95% CI: 0.65-0.73) to 0.76 (95% CI: 0.71-0.81) and the SPE increasing from 0.72 (95% CI: 0.68-0.76) to 0.79 (95% CI: 0.71-0.86). The DOR increased from 6 (95% CI: 5–7) to 12 (95% CI: 7–20), and the AUC increased from 0.77 (95% CI: 0.73–0.80) to 0.84 (95% CI: 0.80–0.87), SEN 0.76 (95% CI: 0.71–0.81) vs. 0.69 (95% CI: 0.65–0.73), SPE 0.79 (95% CI: 0.71–0.86) vs. 0.72 (95% CI: 0.68–0.76), PLR 3.7 (95% CI: 2.6–5.3) vs. 2.5 (95% CI: 2.2–2.9), NLR 0.3 (95% CI: 0.24–0.37) vs. 0.42 (95% CI: 0.38–0.48), DOR 12 (95% CI: 7–20) vs. 6 (95% CI: 5–7), and AUC 0.84 (95% CI: 0.80–0.87) vs. 0.77 (95% CI: 0.73–0.80), respectively.

Compared to the groups of , the diagnostic value of the groups with demonstrated better, SEN 0.75 (95% CI: 0.70–0.80) vs. 0.68 (95% CI: 0.63–0.72), SPE 0.77 (95% CI: 0.71–0.82) vs. 0.75 (95% CI: 0.69–0.79), PLR 3.2 (95% CI: 2.5–4.2) vs. 2.7 (95% CI: 2.2–3.2), NLR 0.33 (95% CI: 0.26–0.41) vs. 0.43 (95% CI: 0.39–0.48), DOR 10 (95% CI: 6–15) vs. 6 (95% CI: 5–8), and AUC 0.82 (95% CI: 0.79–0.86) vs. 0.76 (95% CI: 0.72–0.80), respectively. In terms of the study quality, the studies of had a little higher diagnostic value than the studies of NOS , SEN 0.71 (95% CI: 0.66–0.75) vs. 0.71 (95% CI: 0.65–0.77), SPE 0.76 (95% CI: 0.72–0.80) vs. 0.75 (95% CI: 0.64–0.83), PLR 3.0 (95% CI: 2.5–3.5) vs. 2.8 (95% CI: 2.0–4.0), NLR 0.39 (95% CI: 0.34–0.44) vs. 0.38 (95% CI: 0.31–0.47), DOR 8 (95% CI: 6–10) vs. 7 (95% CI: 5–12), and AUC 0.80 (95% CI: 0.76–0.83) vs. 0.78 (95% CI: 0.74–0.82), respectively. Additionally, we also detected the heterogeneity from subgroups; the of variates such as lncRNAs extracted from tissue and sample decreased obviously from the different groups, which suggested that these variables may be the sources of potential heterogeneity (Table 2).

Then, we constructed a metaregression in terms of the specified covariates including location, sample type, sample size, and quality (Table 3, A–E). During metaregression, the covariate lacks a value, using 0 instead of it. According to the value from large to small, “location,” “quality,” and “sample size” were eliminated one by one. The results showed that the significant heterogeneity of sample size groups and sample type groups was not affected by other covariables; this suggested that the sample type (, 95% CI: 1.19-2.78, ) and sample size (, 95% CI: 1.08-2.68, ) could be considered as the source of heterogeneity in the detection of gastric cancer.

3.5. Sensitivity Analysis and Publication Bias

By excluding individual studies, sensitivity analysis was used to test the impact on overall effects and changes in heterogeneity. As displayed in supplement Figure S1, none of the included individual studies were out of the upper or lower CI limits, suggesting that there was no single heterogeneity study with relatively large overall effects; the selected studies were homogeneously distributed.

No significant publication bias was found in this system. The slope coefficient did not indicate asymmetry, and the value was 0.74 (Figure 4).

3.6. Clinical Utility of lncRNAs in the Diagnosis of GC

Fagan’s nomogram was used to verify the probability of GC being detected by lncRNAs (Figure 5). For anyone having a pretest probability of 20%, if the lncRNA test in cancer detection is positive, the probability of GC after the test will increase to 42%. The negative result of lncRNA detection means that the probability of posttest in the same population will drop to 9%, suggesting that lncRNAs were a promising indicator for the diagnosis of GC.

3.7. Bioinformatics Verification of lncRNA Expression in GC

3.7.1. Differential Expression of lncRNAs in TCGA-STAD Database

Using TCGA database, we verified expression differences of 37 lncRNAs derived from published data in GC. A total of 9 lncRNAs exhibited changed trends consistent with TCGA data, including AC064834.1, H19, HOTAIR, HULC, keratin 18 pseudogene 55 (KRT18P55), PVT1, urothelial cancer-associated 1 (UCA1), C5orf66-AS1, and LINC00086. However, the opposite was found in six lncRNAs, abhydrolase domain containing 11-antisense RNA1 (ABHD11-AS1), gastric cancer-associated transcript 2 (GACAT2), LINC00982, RP11-731F5.2, TINCR, and long intergenic nonprotein coding RNA, regulator of reprogramming (linc-ROR). In addition, for 8 upregulated lncRNAs in the published data, no significant difference was detected. We could not find any data for the remaining 14 lncRNAs in TCGA database (Table 4).

3.7.2. The Diagnostic Efficacy of lncRNA Expression for GC in TCGA-STAD Database

The ROC of the above 9 differentially expressed lncRNAs for GC diagnosis in TCGA-STAD database is shown in Figure 6. PVT1 was a single lncRNA with the optimal diagnostic performance for GC, with an AUC of 0.949 (95% CI: 0.922–0.976), SEN of 0.808, and SPE of 0.969, while PVT1 and C5orf66-AS1 were the most effective combination, with an AUC of 0.972 (95% CI: 0.951–0.992), SEN of 0.941, and SPE of 0.937. The regression equation constructed by such two lncRNAs was (Figure 6 and Table 5).

(a)

(b)

We further analyzed the diagnostic efficacy of this combined model for GC patients with different stages from TCGA database to fully reveal the dynamic changes. According to the -test, the diagnostic efficacy of stage I to stage IV gradually improved, and the AUC of stage IV was significantly higher than that of stage I (Table 6).

4. Discussion

Recent studies have assessed the utility of aberrant lncRNA expression profiles in differentiating between patients with GC patients and cancer-free individuals. However, the results of these studies are inconsistent. We performed this meta-analysis to evaluate whether, and which, lncRNAs have the potential to be biomarkers for GC diagnosis. In this study, we examined relevant articles published on 1st December 2021 and performed subgroup analysis based on the lncRNA genomic locations, sample source, sample size, and quality. We also conducted bioinformatics prediction analysis using TCGA data to further verify the meta-analysis results and construct a lncRNA model for GC diagnosis.

Our meta- and bioinformatics analysis showed that lncRNAs had better SPE (0.71), SEN (0.76), PLR (2.9), NLR (0.39), and AUC (0.79) for the diagnosis of GC than did certain protein markers. Many proteins, such as CEA and CA19-9, are used as biomarkers for GC diagnosis and have been used clinically [70]. However, lncRNAs act as precursor molecules, and their expression may be a better indicator of intrinsic tumor characteristics [71]. In general, the histological specificity of lncRNAs is superior to that of proteins [72], and lncRNAs have the potential advantage of being highly specific diagnostic biomarkers. Although HOTAIR is differentially expressed in various cancers, most lncRNA expression is histologically specific. For example, PCA3, PCGEM1, and PRNCR1 are highly expressed in prostate cancer, while differential HULU expression is related to liver cancer and liver metastasis [73].

When interpreting meta-analysis results, heterogeneity should be considered. The result of Spearman correlation analysis suggested there was no threshold effect. In addition, the test and the value of indicated that there was heterogeneity of nonthreshold effect. However, sensitivity analysis found no obvious studies were identified as outlier studies. According to the subgroup analysis, the DOR and AUC of intergenic lncRNAs, circulating-based lncRNAs, larger sample size (>200), and high quality () groups were superior to antisense lncRNAs, tissue-based lncRNAs, smaller sample size (≤200), and low quality () groups, respectively; however, only circulating lncRNAs had significantly higher AUC than that of tissue lncRNAs.

The genomic location of the lncRNA directly affects lncRNA function. However, in this study, no significant difference was found between the intergenic and antisense groups. The results of the subgroup analysis indicated that circulating group shares better performance than the tissue group; the SEN, SPE, PLR, NLR, and DOR in the blood samples were 0.76, 0.79, 3.7, 0.3, and 12, respectively. In the articles analyzed, the AUC of serum in the GC diagnosis using H19, HULC, and LINC01061 reached 0.943, 0.888, and 0.93, respectively. Future studies of lncRNA expression in the circulation of patients with early stage are necessary to identify a better diagnostic biomarker. The choice of the control group may explain some of the differences between the tissue and circulation groups. NAT was selected as a control for the tissue group, and healthy human serum was selected as a control for the serum group. However, NAT may be affected by the tumor microenvironment which may be why our results show that lncRNAs are not suitable for GC diagnosis from tissue samples. Besides, lncRNA encapsulated by exosomes is more stable in the serum and is not easily degraded by RNase. This suggests that serum-based detection of lncRNA expression is the preferred approach for future studies [49]. Of note, according to the results of subgroup analysis, more high-quality studies with a large sample size are required to further certify the diagnostic value of lncRNAs in GC. At the same time, metaregression analysis was implemented to explore the underlying causes of heterogeneity; we found that different lncRNA sample types and sample size might be the source of heterogeneity.

The reported lncRNA expression in GC most was corroborated by the results of TCGA database. We selected 9 lncRNAs with the same trend in meta- and TCGA analysis for subsequent diagnostic efficacy evaluation. Most previous studies have focused on single lncRNAs as potential biomarkers. However, several lncRNA combinations may have a better diagnostic performance [74]. Here, we identified a combined model of two lncRNAs (PVT1 and C5orf66-AS1) with an AUC of 0.972, which was higher than that of either PVTI (0.943) or C5orf66-AS1 (0.853) alone, indicating a more powerful ability to distinguish between patients with GC and healthy controls, especially for advanced GC patients. The stage often determines a patient’s prognosis; early and advanced GC are treated differently. Surgery is often adopted in the early stages of GC, but in advanced stage cases, radiotherapy or chemotherapy is currently recommended for optimizing the chances of healing. Therefore, the prediction of GC staging is important. In this meta-analysis, the diagnostic efficiency of the lncRNA model in advanced GC was significantly higher than that in the early stage; therefore, we can assess tumor staging in a noninvasive manner, which may influence individual treatment planning. Increased lncRNA PVT1 expression could be a potential diagnostic biomarker for GC [75]. C5orf66-AS1 is an antisense lncRNA located in the first intron region of C5ORF66. C5orf66-AS1 overexpression promotes cervical cancer cell proliferation [76] and is associated with poor prognosis [77]. Previously, we showed that decreased serum levels of C5orf66-AS1 can be utilized for GC diagnosis, especially for early diagnosis [12]. Guo et al. found that abnormal hypermethylation around the C5orf66-AS1 transcription start site is related to its dysregulation and is tumor-specific [78]. It is expected that the combined model described in this study can be verified and applied to assess GC risk.

There are several limitations to be noted in the current meta-analysis: firstly, remarkable heterogeneity was observed in this study, although the results of subgroup analysis could explain some sources of heterogeneity. Secondly, due to a lack of sufficient sample size, we only found that circulating lncRNA was of higher diagnostic efficacy than tissue-based lncRNA, so the predictive ability between serum-based lncRNA and plasma-based lncRNA needs to be further studied. Finally, although we validated most of the results using bioinformatics analysis, the majority of patients included in our study were Chinese except for six studies; thus, the applicability to other races might be limited.

5. Conclusion

Together, these results provided evidence that abnormally expressed lncRNAs might be potential diagnostic biomarkers for GC diagnosis, especially circulating lncRNAs showed superior predictive ability, convenience, and feasibility. Furthermore, the novel combination model of PVT1 and C5orf66-AS1 might achieve better diagnostic efficacy and clinical potential in the prediction of GC. Due to the potential limitations, this study’s clinical application warrants further investigation.

Abbreviations

ABHD11-AS1:	Abhydrolase domain containing 11-antisense RNA1
ANT:	Adjacent nontumor tissue
AUC:	The area under the curve
CA19-9:	Cancer antigen 19-9
CA72-4:	Carbohydrate antigen 72-4
CEA:	Carcinoembryonic antigen
CSCO:	Chinese Society of Clinical Oncology
DOR:	Diagnostic odds ratio
ESMO:	European Society for Medical Oncology
GACAT2:	Gastric cancer-associated transcript 2
GC:	Gastric cancer
HOTAIR:	HOX transcript antisense RNA
HULC:	Highly upregulated in liver cancer
KRT18P55:	Keratin 18 pseudogene 55
linc-ROR:	Long intergenic nonprotein coding RNA, regulator of reprogramming
lncRNAs:	Long noncoding RNAs
NATs:	Natural antisense lncRNAs
NCCN:	National Comprehensive Cancer Network
NLR:	Negative likelihood ratio
NOS:	Newcastle–Ottawa quality scale
PCA3:	Prostate cancer-associated 3
PLR:	Positive likelihood ratio
ROC:	Receiver-operating characteristic
SEN:	Sensitivity
SPE:	Specificity
TCGA:	The Cancer Genome Atlas
TSS:	Transcription start site
UCA1:	Urothelial cancer-associated 1.

Data Availability

The data used to support the findings of this study are included within the article and supplementary information file.

Conflicts of Interest

The authors declare that there is no conflict of interest regarding the publication of this article.

Acknowledgments

This work was funded by grants from the National Key R&D Program of China (2018YFC1311600, 2016YFC1303200) and the Liaoning Province Key R&D Program (2020JH2/10300063).

Supplementary Materials

Supplementary 1. supplement Table S1: the test of threshold effect and nonthreshold effect.

Supplementary 2. supplement Figure S1: sensitivity analysis of the pooled studies.

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Copyright © 2022 Ying-ying Dong et al. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

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