Research Article

Eurotium Cristatum Postfermentation of Fireweed and Apple Tree Leaf Herbal Teas

Table 1

Studied DNA regions of the fungus and primers and PCR annealing temperature.

DNA regions/genesSymbolsThermocycling programsPrimers (5→3)
SymbolsSequences

Entire ITS rDNA and fragment of 28S rDNAITS-D1/D2(1) 94°C–5 min
(2) 33 cycles with temperature interval
94°C–1 min, 51°C–1 min, 72°C–1 min
(3) 72°C–7 min
ITS1fTCCGTAGGTGAACTTGCG
NL4GGTCCGTGTTTCAAGG
Large subunit 28S of ribosomal DNALSU(1) 94°C–5 min
(2) 33 cycles with temperature interval
94°C–1 min, 49°C–1 min, 72°C–2 min
(3) 72°C–7 min
LR0RACCCGCTGAACTTAAGC
LR5TCCTGAGGGAAACTTCG
RNA polymerase II geneRPB2(1) 94°C–5 min
(2) 9 cycles 94°C–1 min, at 60°C to 50°C–1 min (with 1 degree decrement each cycle), 72°C–1.5 min
(3) 32 cycles 94°C–1 min, 50°C–1.5 min, 72°C–1.5 min
(4) 72°C–7 min
fRPB2-5FGAYGAYMGWGATCAYTTYGG
fRPB2-7cRCCAT(AG)GCTTG(CT)TT(AG)CCCAT
Translation elongation factor 1-α geneTEF1-α(1) 94°C–5 min
(2) 9 cycles 94°C–1 min, at 66°C to 56°C–1 min (with 1 degree decrement each cycle), 72°C–1.5 min
(3) 32 cycles 94°C–1 min, 56°C–1.5 min, 72°C–1.5 min
(4) 72°C–7 min
EF-595FCGTGACTTCATCAAGAACATG
EF-1567RACHGTRCCRATACCACCRATCTT
β-tubulin geneβ-tub(1) 94°C–5 min
(2) 9 cycles 94°C–1 min, at 64°C to 54°C–1 min (with 1 degree decrement each cycle), 72°C–1.5 min
(3) 32 cycles 94°C–1 min, 54°C–1.5 min, 72°C–1.5 min
(4) 72°C–7 min
βt2aGGTAACCAAATCGGTGCTGCTTTC
βt2bACCCTCAGTGTAGTGACCCTTGGC
Glycerol 3-phosphate dehydrogenase geneGAPDH(1) 94°C–5 min
(2) 9 cycles 94°C–1 min, at 65°C to 55°C–1 min (with 1 degree decrement each cycle), 72°C–1.5 min
(3) 32 cycles 94°C–1 min, 55°C–1.5 min, 72°C–1.5 min
(4) 72°C–7 min
gpd1CAACGGCTTCGGTCGCA TTG
gpd2GCCAAGCAGTTGGTTGTGC